Collette, B.B., J.R. McDowell, and J.E. Graves. Phylogeny of Recent billfishes (Xiphioidei). Bull. Mar. Sci., in press.
Graves, J.E., and J.R. McDowell. Genetic analysis of white marlin (Tetrapturus albidus) stock structure. Bull. Mar. Sci., in press.
Horodysky, A.Z., D.W. Kerstetter, R.J. Latour, and J.E. Graves. Habitat utilization and vertical movements of white marlin (Tetrapturus albidus) released from commercial and recreational fishing gears in the western North Atlantic Ocean: inferences from short-duration pop-up archival satellite tags (PSATS). Fisheries Oceanography, in press.
McDowell, J.R., and J.E. Graves. Microsatellite and mitochondrial DNA analyses of striped marlin (Tetrapturus audax) population structure in the Pacific Ocean. Can. J. Fish. Aquat. Sci., in press.
Carlsson, J., J.R. McDowell, J.E.L. Carlsson, D. Olafsdottir, and J.E. Graves. 2006. Genetic heterogeneity of Atlantic bluefin tuna caught in the eastern North Atlantic Ocean south of Iceland. ICES J. Mar. Sci. 63:1111-1117.
Portnoy, D.S., J.R. McDowell, K. Thompson, J.A. Musick and J.E. Graves. 2006. Isolation and characterization of five dinucleotide microsatellite loci in the sandbar shark, Carcharhinus plumbeus. Molecular Ecology Notes, 6:431-433.
Kerstetter, D.W., and J.E. Graves. 2006. Survival of white marlin (Tetrapturus albidus) released from commercial pelagic longline gear in the western North Atlantic. Fishery Bulletin, 104:434-444.
Kerstetter, D.W., and J.E. Graves. 2006. Effects of circle versus J-style hooks on target and non-target species in a pelagic longline fishery. Fisheries Research, 80:239-250.
Horodysky, A.Z., and J.E. Graves. 2005. Application of pop-up satellite archival tag technology to estimate postrelease survival of white marlin (Tetrapturus albidus) caught on circle and straight-shank ("J") hooks in the western North Atlantic recreational fishery. Fishery Bulletin, 103:84-96.
Carlsson, J., J.R. McDowell, P. Diaz-Jaimes, J.E.L. Carlsson, S.B. Boles, J.R. Gold, and J.E. Graves. 2004. Microsatellite and mitochondrial DNA analyses of Atlantic bluefin tuna (Thunnus thynnus thynnus) population structure in the Mediterranean Sea. Molecular Ecology 13:3345-3356.
Kerstetter, D.W., J.J. Polovina, and J.E. Graves. 2004. Evidence of shark predation and scavenging of fishes equipped with pop-up satellite archival tags. Fishery Bulletin 102:750-756.
Kerstetter, D.W., B.E. Luckhurst, E.D. Prince, and J.E. Graves. 2003. Use of pop-up satellite archival tags to demonstrate survival of blue marlin (Makaira nigricans) released from pelagic longline gear. Fishery Bulletin 101:939-948
Graves, J.E., and J.R. McDowell. 2003. Stock structure of the world's istiophorid billfishes: a genetic perspective. Marine and Freshwater Res. 54:287-298.
Cordes, J.F., and J.E. Graves. 2003. Investigation of congeneric hybribization in and stock structure of weakfish (Cynoscion regalis) inferred from analyses of nuclear and mitochondrial DNA loci. Fishery Bulletin 101:443-450.
Bostrom, M.A., B.B. Collette, B.E. Luckhurst, K.S. Reece, and J.E. Graves. 2002. Hybridization between two serranids, the coney (Cephalopholis fulva) and the creole fish (Paranthias furcifer), at Bermuda. Fishery Bulletin 100:651-661
McDowell, J.R., P. Diaz-Jaimes, and J.E. Graves. 2002. Isolation and characterization of seven tetra-nucleotide microsatellite loci from Atlantic northern bluefin tuna Thunnus thynnus thynnus. Molecular Ecology Notes 2:214-216.
Orrell, T., K Carpenter, J. Musick, and J.E. Graves. 2002. Phylogenetic and biogeographic analysis of the Sparidae (Perciformes: Percoidei) from cytochrome b sequences. Copeia 2002:618-631.
McDowell, J.R., and J.E. Graves. 2002. Nuclear and mitochondrial DNA markers for specific identification of istiophorid and xiphiid billfishes. Fishery Bulletin 100:537-544.
Falterman, B., and J.E. Graves. 2002. A comparison of the relative mortality and hooking efficiency of circle and straight shank ("J") hooks used in the pelagic longline industry. Amer. Fish. Soc. Symp. 30:80-87.
Graves, J.E., B.E. Luckhurst, and E.D. Prince. 2002. An evaluation of pop-up satellite tags for estimating postrelease survival of blue marlin (Makaira nigricans) from a recreational fishery. Fishery Bulletin 100:134-142.
Reece, K.S., D. Bushek, K.L. Hudson, and J.E. Graves. 2001. Geographic distribution of Perkinsus marinus strains along the US Atlantic and Gulf Coasts. Marine Biology 139:1047-1055.
Cordes, J.F., S.L.Armknecht, E.A. Starkey, and J.E. Graves. 2001. Forensic identification of sixteen species of Chesapeake Bay sportfishes using mitochondrial DNA restriction fragment-length polymorphism (RFLP) analysis. Estuaries 24:49-58.
Buonnacorsi, V.P., J.R. McDowell, and J.E. Graves. 2001. Reconciling patterns of inter-ocean molecular variance from four classes of molecular markers in blue marlin (Makaira nigricans). Molecular Ecology 10:1179-1196.
Buonaccorsi, V.P., E.A. Starkey, and J.E. Graves. 2001. Mitochondrial and nuclear DNA analysis of population subdivision among young-of-the-year Spanish mackerel (Scomberomorus maculatus) from the western Atlantic and Gulf of Mexico. Marine Biology 138: 37-45.
Carlini, D.B., K.S. Reece, and J.E. Graves. 2000. Actin gene evolution and the phylogeny of coleoid cephalopods (Mollusca: Cephalopoda). Mol. Biol. Evol. 17:1353-1370.
Buonaccorsi, V.P., and J.E. Graves. 2000. Isolation and characterization of novel polymorphic tetra-nucleotide microsatellite markers from the blue marlin, Makaira nigricans. Molecular Ecology 9:820-821.
Buonaccorsi, V.P., K.S. Reece, L. W. Morgan, and J.E. Graves. 1999. Geographic distribution of molecular markers within the blue marlin (Makaira nigricans): a hierarchical analysis of allozyme, single copy nuclear DNA and mitochondrial DNA markers. Evolution 53:568-579.
Carlini, D.B., and J.E. Graves. 1999. Phylogenetic analysis of cytochrome c oxidase I sequences to determine higher-level relationships with the coleoid cephalopods. Bull. Mar. Sci. 64:57-76
Scoles, D.R., B.B. Collette, and J.E. Graves. 1998. Global phylogeography of mackerels of the genus Scomber. Fishery Bulletin 96:823-842
Graves, J.E. 1998. Molecular insights into the population structures of cosmopolitan marine fishes. Journal of Heredity. 89:427-437.
Siddall, M.E., K.S. Reece, J.E. Graves and E.M. Burreson. 1997. "Total evidence" refutes the inclusion of Perkinsus species in the phylum Apicomplexa. Parasitology 115: 165-176.
Reece, K.S., M.E. Siddall, E. M. Burreson and J.E. Graves. 1997. Phylogenetic analysis of Perkinsus based upon actin gene sequences. Journal of Parasitology 83(3):417-423.
Reece, K.S., D. Bushek and J.E. Graves. 1997. Molecular markers for population genetic analysis of Perkinsus marinus. Marine Molecular Biology and Biochemistry 6(3):201-210.
Blake, S.G., N.J. Blake, M.J. Oesterling, and J.E. Graves. 1997. Genetic divergence and loss of diversity in two cultured populations of the bay scallop, Argopecten irradians, (Lamarck, 1819). Journal of Shellfish Research 16(1):55-58.
Norrgard, J.W., and J.E. Graves. 1996. Determination of the natal origin of a juvenile loggerhead turtle (Caretta caretta) population in the Chesapeake Bay using mitochondrial DNA analysis. In: B.W. Bowen and W.N. Witzell, eds. Proceedings of a symposium on the genetics of marine turtles. N.M.F.S. Technical Memorandum NMFS-SEFSC-396 pp. 129-136.
Heist, E. J., J.A. Musick, and J.E. Graves. 1996. Population genetics of the Atlantic sharpnose shark (Rhizoprionodon terraenovae) inferred from mitochondrial DNA restriction fragment length polymorphism analysis. Fishery Bulletin 94:664-668.
Heist, E. J., J.A. Musick, and J.E. Graves. 1996. Genetic population structure of the shortfin mako (Isurus oxyrinchus) inferred from restriction fragment length polymorphism analysis of mitochondrial DNA. Canadian Journal of Fisheries and Aquatic Sciences 53: 583-588.
Goodbred, C.O., and J.E. Graves. 1996. Genetic relationships among geographically isolated populations of bluefish (Pomatomus saltatrix). Marine and Freshwater Research 47: 347-355.